Browse of TCMCG006C66011 protein

CDS

Accession Number	TCMCG006C66011
gbkey	CDS
Protein Id	XP_013711778.1
Location	complement(join(12333468..12333582,12333683..12334044,12334165..12334350,12334454..12334627,12334713..12334844,12335011..12335241,12335799..12335876,12335966..12336031,12336142..12336222,12336384..12337153,12337266..12337462,12337674..12337768,12337853..12337993,12338350..12338427,12338615..12338743,12339019..12339150,12339232..12339351,12339445..12339496,12339599..12339730,12339902..12339954,12340039..12340134,12340500..12340645,12340948..12341083,12341169..12341322,12341396..12341886))
Gene	LOC106415571
GeneID	106415571
Organism	Brassica napus

Protein

Length	1448aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA293435
db_source	XM_013856324.2
Definition	cleavage and polyadenylation specificity factor subunit 1 [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category	A
Description	Cleavage and polyadenylation specificity factor
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko03019        [VIEW IN KEGG] ko03021        [VIEW IN KEGG]
KEGG_ko	ko:K14401        [VIEW IN KEGG]
EC	-
KEGG_Pathway	ko03015        [VIEW IN KEGG] map03015        [VIEW IN KEGG]
GOs	GO:0003674        [VIEW IN EMBL-EBI] GO:0003676        [VIEW IN EMBL-EBI] GO:0003723        [VIEW IN EMBL-EBI] GO:0003729        [VIEW IN EMBL-EBI] GO:0005488        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005634        [VIEW IN EMBL-EBI] GO:0005737        [VIEW IN EMBL-EBI] GO:0005829        [VIEW IN EMBL-EBI] GO:0006139        [VIEW IN EMBL-EBI] GO:0006378        [VIEW IN EMBL-EBI] GO:0006379        [VIEW IN EMBL-EBI] GO:0006396        [VIEW IN EMBL-EBI] GO:0006397        [VIEW IN EMBL-EBI] GO:0006725        [VIEW IN EMBL-EBI] GO:0006807        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0010467        [VIEW IN EMBL-EBI] GO:0016070        [VIEW IN EMBL-EBI] GO:0016071        [VIEW IN EMBL-EBI] GO:0031123        [VIEW IN EMBL-EBI] GO:0031124        [VIEW IN EMBL-EBI] GO:0034641        [VIEW IN EMBL-EBI] GO:0043170        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0043631        [VIEW IN EMBL-EBI] GO:0044237        [VIEW IN EMBL-EBI] GO:0044238        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044444        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0046483        [VIEW IN EMBL-EBI] GO:0071704        [VIEW IN EMBL-EBI] GO:0090304        [VIEW IN EMBL-EBI] GO:0090305        [VIEW IN EMBL-EBI] GO:0090501        [VIEW IN EMBL-EBI] GO:0097159        [VIEW IN EMBL-EBI] GO:1901360        [VIEW IN EMBL-EBI] GO:1901363        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGAGTTTCGCGGCCTTCAAGATGATGCATTGGCCCACCGGCGTCGAGAACTGCGCCTCCGGCTACATTACCCACTCCATCTCCGACACAACTCCGATGCAGATTCCCATCACCTCCGGCGACGACCTCGACCCCGATTGGCCCGCTCCCCCCAAGCGCGGGATCTGCGCCGTGCCTAACGTCGTCGTAACCGCCGCCAACGTCCTCGAGGTGTACGTGGTTAGGGTTCAGGAGGAAGGGAACGGTGCTAGCAGCCTGGAGCCGAGGGGGCAGAGGCTCGCTAAGCGCGGCGGAGTATTGGACGGCGTCTCCGGCGTTTCCCTCGAGCTCGTGTGCCATTACAGGCTCCACGGCAACGTTGAGTCGCTCGCGGTGCTTCCTATGGGAGGAGGGAACTCCACCAGGGGGAGGGATTCCATCGTGGTGACGTTCCGCGACGCGAAGATCTCGGTTCTTGAGTTTGATGATTCGATTCATAGTCTTCGATTGAACTCGATGCACTGTTTCGAGGGTCCGGATTGGCTTCATCTGAAAAGAGGAAGAGAGTCGTTTCCAAGAGGGCCTTTGGTGAAAGTGGATCCTCAAGGGAGGTGTGGAGGTGTTCTTGTTTACGGTTTGCAGCTGATCATAATCAAGGCTTCTCAGGTTGGTTCTGGACTAGTTGGGGACGATGATGCGTTCACTTCTGGTGGGACAATTTCTGCTCGAGTTGAATCATCTTACATAATCAACTTGCGTGATCTCGGAATGAAACACGTCAAAGATTTTGTTTTTCTACATGGTTATATTGAGCCTGTAATTGTAATCCTTCAGGAAGAAGAGCATACATGGGCTGGGAGAGTTTCATGGAAGCACCATACTTGCATGCTTTCTGCTCTTAGTATCAATACGACATTAAAACAACACCCAGTCATCTGGTCAGCTATTAATCTGCCCCATGATGCCTACAAACTACTTGCAGTACCATCTCCGATCGGTGGTGTTCTTGTGTTGTGTGCAAATACAATCCATTATCATAGTCAGTCAGCCTCCTGTGCTCTGGCACTGAACAATTATGCCTCCTCAGCTGATAGCAGTCAAGAACTGCCTGCATCAAGTTTCAGTGTGGAACTCGATGCTGCCCATGGAACCTGGATATCGAACGATGTGGCTCTTTTGTCAACGAAGTCTGGGGAATTGTTGCTGCTGACTCTTATATATGATGGGCGTGCTGTGCAGAGACTTGATCTTTCCAAATCAAAAGCCTCTGTGCTTGCTTCGGACATTACTAGTGTTGGAAATTCCCTTTTCTTTTTAGGTAGCCGTTTGGGAGACAGTTTACTGGTTCAATATTCCTGTAGATCTGGACCCGCAGCATCCTTACCTGGGTTGAGAGATGAGGATGAAGATATTGAAGGTGAGAGTCATCAAGCAAAACGTCTGCGGATGTCTTCTGATGCTTTTCAAGATACAGTTGGAAACGAGGAGCTTTCATTGTTTGGTTCAGCCCCAAATAACTCCGATTCATCACAGAAATCATTTTCATTTGCAGTGAGAGATTCACTAGTTAATGTTGGTCCAGTGAAAGATTTTGCTTATGGCTTAAGGATAAATGCTGATGCAAACGCCACTGGGATTTCCAAACAGAGCAACTATGAATTGGTGTGCTGTTCTGGTCATGGGAAGAATGGTGCTTTATCTGTTCTTCGGCAGTCAATTAGACCCGAAATGATTACTGAGGTTGAACTTGGAAGCTGCAAAGGAATATGGACAGTTTATCACAAGAGCTCCCGTGGTCATAATGTTGATTCTTCTAAAATGGCTGCTGATGAGGATGAATATCATGCCTATTTGATTATAAGTTTGGAGGCTCGCACTATGGTACTTGAAACTGCGGACCTTCTCACAGAAGTCACTGAGAGTGTTGACTATTATGTTCAGGGAAGAACAATTGCTGCTGGAAATTTGTTTGGAAGACGTCGGGTAATCCAGGTGTTTGAGCATGGTGCCCGTATACTGGATGGTTCTTTTATGAATCACGAATTAAACTTTGGAGCTTCTAATACAGAATCCAATTCTGGTTCTGAAAGTTCCACTGTGGCATCTGTTTCAATTGCCGATCCATATGTTTTACTTAGAATGACAGATGGCAGCATTCGCCTGCTTGTTGGAGATCCTTCGACTTGCACAGTTTCTATAAGTACTCCATCTGTACTTGAAGGCTCTAAAAGGAAGGTATCGGCATGTACTTTGTACCATGATAAAGGACCAGAACCCTGGCTAAGGAAAGCTAGCACTGATGCATGGCTTTTGTCAGGAGTTGGAGAGGCTGTTGATAGTGCTGATGGTGGACCTCATGATCAGGGTGACATATACTGTGTCCTTTGCTACGAAAGTGGTGCCCTTGAGATATTTGATGTGCCTAGTTTCAATTGTGTTTTCTCTGTTGATAAATTTGCATCTGGAAGAAGCCACCTCTCTGATATGCCTATTCATGAGCTAGAGTATGAACTCAACAAAAAATCCCAGGATAATGTTTCTGCAAGGAATGAAGACATTGTGAAGACAAAGGTCGTTGAGTTAGCTATGCAAAGATGGTCTGGGCACCATACACGCCCATTTCTGTTTGCAGTTTTGGCTGATGGCACAATTCTTTGTTACCATGCTTACCTGTTTGAGGGTGTTGATGGTACCAACGCAGAGAATAGTGTTTCTTCAGAAAATCCTGCTGCGTTAAATTCCTCCAGCAGTTCTAAGCTTAGGAATCTGAGATTTCTCCGCATCCCCTTGGACACGTCTACGAGAGAGGAGACTTCAGACGGTGTTGCAGCTCAAAGAATTACCATGTTCAAGAATATTAGCGGTCACCAGGGATTTTTTCTTTCTGGCTCAAGACCAGGTTGGTGCATGTTGTTCAGAGAAAGACTTCGATTTCATTCACAGCTGTGCGATGGATCAATTGTGGCTTTTACTGTGCTTCACAATGTGAATTGCAATCACGGATTCATATATGTCACGTCACAGGGAGTTTTGAAGATTTGCCAATTACCTTCAGCACCAGTCTACGATAACTATTGGCCAGTGCAAAAGATTCCTCTGAAGGCCACGCCTCACCAAGTTACTTACTACGCGGAGAAGAACTTGTACCCACTGATAGTATCATATCCGGTCAGCAAGCCATTGCATCAAGTGCTTTCTTCCCTAGTTGATCAAGAAGCTGGGCAGCAGATTGACAACCATAATCTGAGCTCTGATGATCTCCAACGACCATACACCGTTGAGGAATTTGAAATCCGAATTTTGGAACCAGAAAGATCGGGTGGCCCTTGGGAAACTAAAACCACTATTCCAATGCAGAGCTCAGAACATGCACTCACTGTGCGAGTTGTCACACTTCTTAATGCAAGCACAGCGGAGAATGAAACCCTTCTTGCCGTTGGAACTGCTTATGTCCAAGGGGAGGACGTTGCTGCAAGGGGCCGTGTGCTTCTTTTCTCTTTTGGAAGAAATGGCGATAATTCTCAAAGTTTGGTTACTGAAGTCTACTCAAAGGAACTAAAAGGAGTTGTATCAGCTGTAGCCTCCATTCAGGGTCATCTTCTAATATCATCTGGTCCTAAAGTCACCTTGCACAAATGGAATGGCACTGAATTAACTGGTGTTGCTTTCTTTGATCCGCCGCTCTATGTAGTCAGCATGAATGTGGTAAAGAATTTCATCCTCCTTGGTGATGTTCACAAAAGCGTATACTTTCTTAGCTGGAAAGAACAAGGGTCCCAACTTAGCTTACTAGCCAAAGATTTTGGATCCCTCGATTGTATGGCTTCAGAGTTTTTGATTGATGGAAGTACGCTAAGCCTGGCTGTCTCCGATCAGCAAAAAAATCTCCAGATATTCTATTTCGCACCGAAGATGTCGGAGAGCTGGAAGGGTCAGAAACTTCTGTCAAGGGCGGAATTTCACGTGGGTGCGCATGTGACAAAGTTCCTGCGTCTGCAGATGGTTGAATCTCTCAGCGCGGATAAAAAAAGTCGATACGCTTCGTTATTTGGTACTCTAGACGGCAGTTTTGGTTGCATAGCTCCACTAGATGAGGTCACATTCCGTAGGTTACAGTCTCTCCAGAAAAAGCTAGTGGATGCTGTTCCTCATGTTGCCGGTCTGAACCCACGCTCTTTCCGTCAGTTCCGCTCGAGTGGTAAGGCTCGAAAACCTGGGCCTGACAGCATAATCGACTGCGAGCTACTCTGCCATTACGAGATGCTTCCACTAGAGGAGCAGCATGCACTTGCTCAGCAGATTGGGACAACCCGAGCTCAGATTTTTGCGAATCTAGTTGAGCTCTCTGTCGGAACCAGCTTCTTGTGA

Protein:   MSFAAFKMMHWPTGVENCASGYITHSISDTTPMQIPITSGDDLDPDWPAPPKRGICAVPNVVVTAANVLEVYVVRVQEEGNGASSLEPRGQRLAKRGGVLDGVSGVSLELVCHYRLHGNVESLAVLPMGGGNSTRGRDSIVVTFRDAKISVLEFDDSIHSLRLNSMHCFEGPDWLHLKRGRESFPRGPLVKVDPQGRCGGVLVYGLQLIIIKASQVGSGLVGDDDAFTSGGTISARVESSYIINLRDLGMKHVKDFVFLHGYIEPVIVILQEEEHTWAGRVSWKHHTCMLSALSINTTLKQHPVIWSAINLPHDAYKLLAVPSPIGGVLVLCANTIHYHSQSASCALALNNYASSADSSQELPASSFSVELDAAHGTWISNDVALLSTKSGELLLLTLIYDGRAVQRLDLSKSKASVLASDITSVGNSLFFLGSRLGDSLLVQYSCRSGPAASLPGLRDEDEDIEGESHQAKRLRMSSDAFQDTVGNEELSLFGSAPNNSDSSQKSFSFAVRDSLVNVGPVKDFAYGLRINADANATGISKQSNYELVCCSGHGKNGALSVLRQSIRPEMITEVELGSCKGIWTVYHKSSRGHNVDSSKMAADEDEYHAYLIISLEARTMVLETADLLTEVTESVDYYVQGRTIAAGNLFGRRRVIQVFEHGARILDGSFMNHELNFGASNTESNSGSESSTVASVSIADPYVLLRMTDGSIRLLVGDPSTCTVSISTPSVLEGSKRKVSACTLYHDKGPEPWLRKASTDAWLLSGVGEAVDSADGGPHDQGDIYCVLCYESGALEIFDVPSFNCVFSVDKFASGRSHLSDMPIHELEYELNKKSQDNVSARNEDIVKTKVVELAMQRWSGHHTRPFLFAVLADGTILCYHAYLFEGVDGTNAENSVSSENPAALNSSSSSKLRNLRFLRIPLDTSTREETSDGVAAQRITMFKNISGHQGFFLSGSRPGWCMLFRERLRFHSQLCDGSIVAFTVLHNVNCNHGFIYVTSQGVLKICQLPSAPVYDNYWPVQKIPLKATPHQVTYYAEKNLYPLIVSYPVSKPLHQVLSSLVDQEAGQQIDNHNLSSDDLQRPYTVEEFEIRILEPERSGGPWETKTTIPMQSSEHALTVRVVTLLNASTAENETLLAVGTAYVQGEDVAARGRVLLFSFGRNGDNSQSLVTEVYSKELKGVVSAVASIQGHLLISSGPKVTLHKWNGTELTGVAFFDPPLYVVSMNVVKNFILLGDVHKSVYFLSWKEQGSQLSLLAKDFGSLDCMASEFLIDGSTLSLAVSDQQKNLQIFYFAPKMSESWKGQKLLSRAEFHVGAHVTKFLRLQMVESLSADKKSRYASLFGTLDGSFGCIAPLDEVTFRRLQSLQKKLVDAVPHVAGLNPRSFRQFRSSGKARKPGPDSIIDCELLCHYEMLPLEEQHALAQQIGTTRAQIFANLVELSVGTSFL